Package: GOplot 1.0.2

GOplot: Visualization of Functional Analysis Data

Implementation of multilayered visualizations for enhanced graphical representation of functional analysis data. It combines and integrates omics data derived from expression and functional annotation enrichment analyses. Its plotting functions have been developed with an hierarchical structure in mind: starting from a general overview to identify the most enriched categories (modified bar plot, bubble plot) to a more detailed one displaying different types of relevant information for the molecules in a given set of categories (circle plot, chord plot, cluster plot, Venn diagram, heatmap).

Authors:Wencke Walter [aut, cre], Fatima Sanchez-Cabo [aut]

GOplot_1.0.2.tar.gz
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GOplot_1.0.2.tgz(r-4.4-any)GOplot_1.0.2.tgz(r-4.3-any)
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GOplot.pdf |GOplot.html
GOplot/json (API)

# Install 'GOplot' in R:
install.packages('GOplot', repos = c('https://wencke.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/wencke/wencke.github.io/issues

Datasets:
  • EC - Transcriptomic information of endothelial cells.

On CRAN:

6.50 score 18 stars 207 scripts 1.7k downloads 269 mentions 10 exports 30 dependencies

Last updated 8 years agofrom:91963feeaf. Checks:ERROR: 1 WARNING: 6. Indexed: yes.

TargetResultDate
Doc / VignettesFAILNov 09 2024
R-4.5-winWARNINGNov 09 2024
R-4.5-linuxWARNINGNov 09 2024
R-4.4-winWARNINGNov 09 2024
R-4.4-macWARNINGNov 09 2024
R-4.3-winWARNINGNov 09 2024
R-4.3-macWARNINGNov 09 2024

Exports:chord_datcircle_datGOBarGOBubbleGOChordGOCircleGOClusterGOHeatGOVennreduce_overlap

Dependencies:clicolorspacefansifarverggdendroggplot2gluegridExtragtableisobandlabelinglatticelifecyclemagrittrMASSMatrixmgcvmunsellnlmepillarpkgconfigR6RColorBrewerrlangscalestibbleutf8vctrsviridisLitewithr